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Plant Phenomics & Phenotyping

 

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Scanalyzer PL Discovery Platform

Low througput, but a great deal of options Connect your plant phenotype with genomic data
  • Application examples for the sacnalyzer image analysis
The Highly flexible and easily customisable LemnaLauncher software covers a wide range of applications.

  • Plant phenotyping & functional genomics
Non-destructive, multispectral plant imaging and compehensive control of water evaportion/supply allow optimal assessment of GxE impact on phenotypes under stress or natural field conditions.

  • Breeding of new traits
Quantitative phenotype assessment of seed collections/crossing programmes guarantees fast data access, even with complex traits such as drought tolerance.
  • High-content & high- throughput screening
Multi-parameter assessment of a wide range of organisms and assay types across thousand of samples provides a reliable basis for agrochemical/pharmaceutical screening.

  • Life science research & drug Discovery
Assesment of small organisms( nematodes, fish eggs, parasites) and cell cultures-new prospects for the screening of active ingredients and pharmacological key structures.

  • Colony counting & cell analysis
Colony counting and automatic documentation is getting increasingly important for food beverage and pharmaecutical products.

  • Ecotoxicology
LemnaTec provides comprehansive imaging solutions for statndardised and research Tests (duckweed, daphinds, nematodes), thus maximising the quality of test results.

  • Quality Control
All scanalyzer hard- and software modules can be customised to target most quality control solutions in agriculture or pharmaceutical applications.




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  • Item Code: PL

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ScanalyzerHTS

Small plant phenotyping, high content and high throughput screening

The scanalyzer HTS is the best option for the analysis of small plants in multiwell plates or trays in specific growth chambers. The closed cabinet – containing backlight/direct or diffuse top light illumination as well as fluorescent imaging with blue light excitation – guarantees reproducible imaging conditions for all camera types provided by LemnaTec (VIS, NIR, IR, and Fluorescence).

Positioning can be easily exchanged to accommodate varying plant containers and illumination types. Using zoom lens systems allows imaging of fully grown Arabidopsis rosettes or complete multiwell plates/6 wells of a 96-well plate. Precise camera movement and automated tray identification by barcode enable the reliable identification of individual plants. 3-D laser scans provide further information about plant height profiles. While the scanalyzerHTS is designed as a measurement instrument, -customised solutions may be placed in growth chambers.

ScanalyzerHTS – high-throughput screening in perfection

The LemnaTec scanalyzer HTS is the preferred platform for high-throughput screening of leaf disk assays, fungi, insects or small aquatic/terrestrial organisms such as mosquito larvae or nematodes of fish embryos. All four LemnaTec camera systems (Visible, Fluorescence, Infrared, Near Infrared) can be applied to achieve even more detailed, single-well scanning for high-resolution growth analysis. Depending on the number and type of samples the cameras move over an array of up to 100 multiwell plates, achieving an assessment of up to 9600 different samples in one run. Additionally available robots store plates or place them in different functional locations.

Analysing movement of small organisms

In combination with LemnaTrack, the scanalyzerHTS provides unique opportunities to simultaneously observe large numbers of small moving organisms. The observation time for each well ranges from seconds to minutes, depending on organism velocity. Movement patterns and the localisation/intensity of the movement can be quantified. Repeated measurement runs allow quantification of movement development over time, which is particularly useful for fast developing organisms (fish embryos). In all cases static image information is combined with movement information to assign movement patterns to single organisms.

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  • Item Code: HTS

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Scanalyzer3D Discovery Platform

Accelerating Plant phenomics

LemnaTec scanalyzer systems open new prospects for the quantitative , non destructive analysis of different crops or model plants under high - throughput conditions. Each plant is imaged sequentially in multiple scanalyzer3D camera units, employing different wavelengths that reach for beyond human vision. The result is an unprecedented number of repodurcible and significant data points on any aspect of plant development.

Data will be collected continuously and recorded in one snapshot per run through the Sacanlyzer3D , thus routinely producing 15 or more images and several hundred data points per plant and run. Plants are imaged in multiple runs throughout their entire life cycle. All data is available in the database within minutes of imaging -for unparalleled monitoring of dynamic plant development. Comprehnsive quantitative representation of plants in datasets generates special data for physiological and genetic plant modeling to identify and quantfy the concealed parameters that really control plant development. Such deep insights into plant biology accelerate phenomics and enable plant breeding to deal with the challenges of the 21 century.

Scanning-infrared light

With infrared light, high-throughput 3-D systems provide a unique chance to quantify temperature diffrences (e.g. within leaves and between plants)

Scanning- Visible light

High-resolution colour images taken from the top and several sides under reproducible illumination conditions provide the best basis for comperhensive phenotyping.

Scanning -near infrared light roots

Humidity visualisation in root columns by near infrared light provides added information on spatial root performances of plants under high throughput conditions.

Scanning -near infrared light

visualisation of water distribution and dynamics (1450-1550nm ) as well as further NIR- absorbing ingrediants.

Scanning -fluorescent light

Using blue light large field excitation (<500 nm) in back /top light conditions visualises any related fluorescence 520 and 750 (GFP, chlorophyll etc.)



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  • Item Code: 3D

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Scanalyzer Field

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Scanalyzer Field

A wide range of choices for the quantitative, non-destructive analysis of different crops or model plants in field conditions.

Field phenotyping is the classical strategy to assess qualitatively and quantitatively agronomical important traits for field-grown plants. Many assessment methods are based on direct visual assessment or the manual use of portable measurement units. Considering the increasing amount of non-destructive, image-based measurement systems that have become available in the last few years, there is a strong tendency to use these non-destructive methods in the field as well as in more controlled environments like greenhouses and growth rooms.

Compared to greenhouse and growth room phenotyping, outdoor measurement systems have to accommodate the high temporal variability of environmental growth conditions in the field. Furthermore, field conditions challenge durability of the measurement systems which must also have the operating range to cope with the high dynamics of measurement conditions- especially the variability of light quality and quantity affecting any image-based measurement system

Precision Robotics

The LemnaTec ScanalyserField has a unique robotic sensor arm that allows mounting of multiple overhead cameras for precise, reproducible (5mm) X Y movement as well as side cameras mounted on a vertical moving robotic arm. Additionally, environmental monitoring sensors (CO2, humidity, wind, light, temperature) are optional to constantly tag meta-data for inclusion with all image analysis data.

All sensors are housed in rugged housing design that is temperature controlled to ensure a wide range of temperature, humidity and other adverse environmental working conditions.

Imaging sensors include:

  • Visible light
  • Near infrared (water imaging)
  • Infrared (heat imaging)
  • Multispectral imaging
  • Fluorescence
  • Laser height profiling


Additional Information:

  • Item Code: Field

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